Human Activity Recognition (HAR) is one of the core research areas in mobile and wearable computing. With the application of deep learning (DL) techniques such as CNN, recognizing periodic or static activities (e.g, walking, lying, cycling, etc.) has become a well studied problem. What remains a major challenge though is the sporadic activity recognition (SAR) problem, where activities of interest tend to be non periodic, and occur less frequently when compared with the often large amount of irrelevant background activities. Recent works suggested that sequential DL models (such as LSTMs) have great potential for modeling nonperiodic behaviours, and in this paper we studied some LSTM training strategies for SAR. Specifically, we proposed two simple yet effective LSTM variants, namely delay model and inverse model, for two SAR scenarios (with and without time critical requirement). For time critical SAR, the delay model can effectively exploit predefined delay intervals (within tolerance) in form of contextual information for improved performance. For regular SAR task, the second proposed, inverse model can learn patterns from the time series in an inverse manner, which can be complementary to the forward model (i.e.,LSTM), and combining both can boost the performance. These two LSTM variants are very practical, and they can be deemed as training strategies without alteration of the LSTM fundamentals. We also studied some additional LSTM training strategies, which can further improve the accuracy. We evaluated our models on two SAR and one non-SAR datasets, and the promising results demonstrated the effectiveness of our approaches in HAR applications.
translated by 谷歌翻译
Magnetic Resonance Fingerprinting (MRF) is an efficient quantitative MRI technique that can extract important tissue and system parameters such as T1, T2, B0, and B1 from a single scan. This property also makes it attractive for retrospectively synthesizing contrast-weighted images. In general, contrast-weighted images like T1-weighted, T2-weighted, etc., can be synthesized directly from parameter maps through spin-dynamics simulation (i.e., Bloch or Extended Phase Graph models). However, these approaches often exhibit artifacts due to imperfections in the mapping, the sequence modeling, and the data acquisition. Here we propose a supervised learning-based method that directly synthesizes contrast-weighted images from the MRF data without going through the quantitative mapping and spin-dynamics simulation. To implement our direct contrast synthesis (DCS) method, we deploy a conditional Generative Adversarial Network (GAN) framework and propose a multi-branch U-Net as the generator. The input MRF data are used to directly synthesize T1-weighted, T2-weighted, and fluid-attenuated inversion recovery (FLAIR) images through supervised training on paired MRF and target spin echo-based contrast-weighted scans. In-vivo experiments demonstrate excellent image quality compared to simulation-based contrast synthesis and previous DCS methods, both visually as well as by quantitative metrics. We also demonstrate cases where our trained model is able to mitigate in-flow and spiral off-resonance artifacts that are typically seen in MRF reconstructions and thus more faithfully represent conventional spin echo-based contrast-weighted images.
translated by 谷歌翻译
Objective: We aim to develop an open-source natural language processing (NLP) package, SODA (i.e., SOcial DeterminAnts), with pre-trained transformer models to extract social determinants of health (SDoH) for cancer patients, examine the generalizability of SODA to a new disease domain (i.e., opioid use), and evaluate the extraction rate of SDoH using cancer populations. Methods: We identified SDoH categories and attributes and developed an SDoH corpus using clinical notes from a general cancer cohort. We compared four transformer-based NLP models to extract SDoH, examined the generalizability of NLP models to a cohort of patients prescribed with opioids, and explored customization strategies to improve performance. We applied the best NLP model to extract 19 categories of SDoH from the breast (n=7,971), lung (n=11,804), and colorectal cancer (n=6,240) cohorts. Results and Conclusion: We developed a corpus of 629 cancer patients notes with annotations of 13,193 SDoH concepts/attributes from 19 categories of SDoH. The Bidirectional Encoder Representations from Transformers (BERT) model achieved the best strict/lenient F1 scores of 0.9216 and 0.9441 for SDoH concept extraction, 0.9617 and 0.9626 for linking attributes to SDoH concepts. Fine-tuning the NLP models using new annotations from opioid use patients improved the strict/lenient F1 scores from 0.8172/0.8502 to 0.8312/0.8679. The extraction rates among 19 categories of SDoH varied greatly, where 10 SDoH could be extracted from >70% of cancer patients, but 9 SDoH had a low extraction rate (<70% of cancer patients). The SODA package with pre-trained transformer models is publicly available at https://github.com/uf-hobiinformatics-lab/SDoH_SODA.
translated by 谷歌翻译
Large language models (LLMs) have been shown to be able to perform new tasks based on a few demonstrations or natural language instructions. While these capabilities have led to widespread adoption, most LLMs are developed by resource-rich organizations and are frequently kept from the public. As a step towards democratizing this powerful technology, we present BLOOM, a 176B-parameter open-access language model designed and built thanks to a collaboration of hundreds of researchers. BLOOM is a decoder-only Transformer language model that was trained on the ROOTS corpus, a dataset comprising hundreds of sources in 46 natural and 13 programming languages (59 in total). We find that BLOOM achieves competitive performance on a wide variety of benchmarks, with stronger results after undergoing multitask prompted finetuning. To facilitate future research and applications using LLMs, we publicly release our models and code under the Responsible AI License.
translated by 谷歌翻译
Transformer-based models, capable of learning better global dependencies, have recently demonstrated exceptional representation learning capabilities in computer vision and medical image analysis. Transformer reformats the image into separate patches and realize global communication via the self-attention mechanism. However, positional information between patches is hard to preserve in such 1D sequences, and loss of it can lead to sub-optimal performance when dealing with large amounts of heterogeneous tissues of various sizes in 3D medical image segmentation. Additionally, current methods are not robust and efficient for heavy-duty medical segmentation tasks such as predicting a large number of tissue classes or modeling globally inter-connected tissues structures. Inspired by the nested hierarchical structures in vision transformer, we proposed a novel 3D medical image segmentation method (UNesT), employing a simplified and faster-converging transformer encoder design that achieves local communication among spatially adjacent patch sequences by aggregating them hierarchically. We extensively validate our method on multiple challenging datasets, consisting anatomies of 133 structures in brain, 14 organs in abdomen, 4 hierarchical components in kidney, and inter-connected kidney tumors). We show that UNesT consistently achieves state-of-the-art performance and evaluate its generalizability and data efficiency. Particularly, the model achieves whole brain segmentation task complete ROI with 133 tissue classes in single network, outperforms prior state-of-the-art method SLANT27 ensembled with 27 network tiles, our model performance increases the mean DSC score of the publicly available Colin and CANDI dataset from 0.7264 to 0.7444 and from 0.6968 to 0.7025, respectively.
translated by 谷歌翻译
当前的多类多类别对象跟踪(MOT)指标使用类标签来分组跟踪结果以进行每类评估。同样,MOT方法通常仅将对象与相同的类预测相关联。这两种MOT中的普遍策略隐含地假设分类性能几乎完美。但是,这远非最近的大型MOT数据集中的情况,这些数据集包含许多罕见或语义上类似类别的类别。因此,所得的不正确分类导致跟踪器的基准跟踪和基准不足。我们通过将分类与跟踪无关,以解决这些问题。我们引入了一个新的指标,跟踪所有准确性(TETA),将跟踪测量测量分为三个子因素:本地化,关联和分类,即使在不准确的分类下,也可以全面地跟踪性能的基准测试。 TETA还处理了大规模跟踪数据集中具有挑战性的不完整注释问题。我们进一步介绍了使用类示例匹配(CEM)执行关联的每件事跟踪器(TETER)。我们的实验表明,TETA对跟踪器进行更全面的评估,并且与最先进的ART相比,TETE对挑战性的大规模数据集BDD100K和TAO进行了重大改进。
translated by 谷歌翻译
目的是对临床文本去识别的自然语言处理(NLP)模型的评估取决于临床注释的可用性,临床注释通常由于隐私问题而受到限制。 NLP沙盒是一种通过采用联合模型到数据的方法来减轻NLP模型缺乏数据和评估框架的方法。这使得无偏见的联合模型评估无需共享多个机构的敏感数据。材料和方法我们利用Synapse协作框架,容器化软件和OpenAPI Generator来构建NLP沙盒(NLPSANDBOX.IO)。我们使用来自三个机构的数据评估了两个最先进的NLP去识别注释模型Philter和Neuroner。我们使用来自外部验证站点的数据进一步验证了模型性能。结果我们通过去识别临床模型评估证明了NLP沙箱的有用性。外部开发人员能够将其模型纳入NLP沙盒模板中,并提供用户体验反馈。讨论我们证明了使用NLP沙箱对临床文本去识别模型进行多站点评估的可行性,而无需共享数据。标准化模型和数据模式可以使模型传输和实现平稳。为了概括NLP沙箱,数据所有者和模型开发人员需要进行工作,以开发合适和标准化的模式,并调整其数据或模型以适合模式。结论NLP沙箱降低了利用临床数据进行NLP模型评估的障碍,并促进了联合会的NLP模型的联合,多站点,无偏见的评估。
translated by 谷歌翻译
我们介绍了一个大规模实验,该实验对编码器进行了预处理,其参数计数范围从700m到9.3b不等,随后蒸馏到较小的型号中,范围为17m-170亿参数,其应用到自然语言理解(NLU)组件(NLU)组件(虚拟助手系统。尽管我们使用70%的口语数据训练,但在对书面形式的跨语性自然语言推论(XNLI)语料库进行评估时,我们的教师模型与XLM-R和MT5相当。我们使用系统中的内域数据对教师模型进行了第二阶段的训练,以提高了3.86%的相对分类,而相对7.01%的插槽填充。我们发现,即使是从我们的2阶段教师模型中提取的170亿参数模型,与仅接受公共数据的2.3B参数老师相比,与2.3B参数老师相比,意图分类更好2.88%,并且7.69%的插槽填充错误率更好(第1阶段),强调了。内域数据对训练的重要性。当使用标记的NLU数据进行离线评估时,我们的17m参数阶段2蒸馏模型的表现分别优于XLM-R碱基(85m Params)和Distillbert(42m Params),分别优于4.23%至6.14%。最后,我们介绍了一个完整的虚拟助手实验平台的结果,在该平台中,我们发现使用经过预训练和蒸馏管道训练的模型超过了从8500万参数教师蒸馏的模型,在自动测量全系统用户不满的自动测量中,从8500万参数教师蒸馏出3.74%-4.91%。
translated by 谷歌翻译
语言模型既展示了定量的改进,又展示了新的定性功能,随着规模的增加。尽管它们具有潜在的变革性影响,但这些新能力的特征却很差。为了为未来的研究提供信息,为破坏性的新模型能力做准备,并改善社会有害的效果,至关重要的是,我们必须了解目前和近乎未来的能力和语言模型的局限性。为了应对这一挑战,我们介绍了超越模仿游戏基准(Big Bench)。 Big Bench目前由204个任务组成,由132家机构的442位作者贡献。任务主题是多样的,从语言学,儿童发展,数学,常识性推理,生物学,物理学,社会偏见,软件开发等等。 Big-Bench专注于被认为超出当前语言模型的功能的任务。我们评估了OpenAI的GPT型号,Google内部密集变压器体系结构和大型基础上的开关稀疏变压器的行为,跨越了数百万到数十亿个参数。此外,一个人类专家评估者团队执行了所有任务,以提供强大的基准。研究结果包括:模型性能和校准都随规模改善,但绝对的术语(以及与评估者的性能相比);在模型类中的性能非常相似,尽管带有稀疏性。逐渐和预测的任务通常涉及大量知识或记忆成分,而在临界规模上表现出“突破性”行为的任务通常涉及多个步骤或组成部分或脆性指标;社交偏见通常会随着含糊不清的环境而随着规模而增加,但这可以通过提示来改善。
translated by 谷歌翻译
深度学习方法已成为重建MR重建的最新采样的状态。特别是对于地面真理不可行或不可能的情况,要获取完全采样的数据,重建的自我监督的机器学习方法正在越来越多地使用。但是,在验证此类方法及其普遍性的验证中的潜在问题仍然没有得到充实的态度。在本文中,我们研究了自制算法验证未采样MR图像的重要方面:对前瞻性重建的定量评估,前瞻性和回顾性重建之间的潜在差异,常用的定量衡量标准的适用性和普遍性。研究了两种基于自我监督的denoising和先验的深层图像的自我监督算法。将这些方法与使用体内和幻影数据的最小二乘拟合以及压缩感测重建进行比较。它们的推广性通过前瞻性采样的数据与培训不同的数据进行了测试。我们表明,相对于回顾性重建/地面真理,前瞻性重建可能表现出严重的失真。此外,与感知度量相比,与像素定量指标的定量指标可能无法准确捕获感知质量的差异。此外,所有方法均显示出泛化的潜力。然而,与其他变化相比,概括性的影响更大。我们进一步表明,无参考图像指标与人类对图像质量的评级很好地对应,以研究概括性。最后,我们证明了经过调整的压缩感测重建和学习的DeNoising在所有数据上都相似地执行。
translated by 谷歌翻译